STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tmem14aTransmembrane protein 14A. (101 aa)    
Predicted Functional Partners:
nuf2
NUF2 component of NDC80 kinetochore complex.
    
 0.814
ENSECRP00000021383
annotation not available
    
  0.663
LOC114657089
Kinetochore protein NDC80 homolog.
    
  0.663
spc25
SPC25 component of NDC80 kinetochore complex.
    
  0.603
LOC114669453
Kinetochore protein Spc25-like.
    
  0.603
aurka
Aurora kinase A.
     
 0.584
aurkb
Aurora kinase B.
     
 0.584
ENSECRP00000001142
annotation not available
      
 0.555
tmem164
Transmembrane protein 164.
      
 0.555
tmem205
Transmembrane protein 205.
   
  
 0.545
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.