STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sik3SIK family kinase 3. (1292 aa)    
Predicted Functional Partners:
crtc2
CREB regulated transcription coactivator 2.
    
 0.799
ENSECRP00000028747
annotation not available
    
 0.799
LOC114644133
CREB-regulated transcription coactivator 3-like.
    
 0.799
pla2g4a
Phospholipase A2 group IVA.
    
 0.692
scgn
Secretagogin, EF-hand calcium binding protein.
   
 0.603
ripk4
Receptor interacting serine/threonine kinase 4.
    
0.592
cask
Calcium/calmodulin dependent serine protein kinase.
   
0.575
dmbx1
Diencephalon/mesencephalon homeobox 1.
      
 0.535
magi3
Membrane associated guanylate kinase, WW and PDZ domain containing 3.
    
 0.505
chek2
Checkpoint kinase 2.
    
0.504
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.