STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSECRP00000019709annotation not available (432 aa)    
Predicted Functional Partners:
ENSECRP00000011256
annotation not available
    
  0.634
cbs
Cystathionine beta-synthase.
      
 0.532
prdm12
PR/SET domain 12.
      
 0.457
nts
Neurotensin.
    
 0.455
eif2ak3
Eukaryotic translation initiation factor 2 alpha kinase 3.
      
 0.446
pomc
Proopiomelanocortin.
    
 0.428
LOC114662125
Ankyrin repeat and SOCS box protein 12-like.
    
 
 0.428
gnal
G protein subunit alpha L.
    
 0.426
gnas
GNAS complex locus.
    
 0.426
rbmx
RNA binding motif protein X-linked.
      
 0.426
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.