STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ppp1r9aProtein phosphatase 1 regulatory subunit 9A. (1298 aa)    
Predicted Functional Partners:
ppp1ca
Protein phosphatase 1 catalytic subunit alpha.
    
 
 0.629
LOC114661600
Serine/threonine-protein phosphatase alpha-2 isoform-like.
    
 
 0.629
ppp1cc
Protein phosphatase 1 catalytic subunit gamma.
    
 
 0.629
LOC114652730
Serine/threonine-protein phosphatase PP1-beta catalytic subunit-like.
    
 
 0.597
ppp1cb
Protein phosphatase 1 catalytic subunit beta.
    
 
 0.597
ppp1r15b
Protein phosphatase 1 regulatory subunit 15B.
     
 0.584
shoc2
SHOC2 leucine rich repeat scaffold protein.
    
  0.433
lrrd1
Leucine rich repeats and death domain containing 1.
    
  0.433
dcx
Doublecortin.
    
 
 0.428
lrfn1
Leucine rich repeat and fibronectin type III domain containing 1.
   
 0.409
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.