STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
adck5aarF domain containing kinase 5. (578 aa)    
Predicted Functional Partners:
coq3
Coenzyme Q3, methyltransferase.
  
 0.849
ndufs3
NADH:ubiquinone oxidoreductase core subunit S3.
   
 0.688
ndufv2
NADH:ubiquinone oxidoreductase core subunit V2.
    
 0.682
alad
Aminolevulinate dehydratase.
    
 0.659
ndufs8
NADH:ubiquinone oxidoreductase core subunit S8.
    
  0.650
LOC114667105
NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial-like.
    
  0.649
gpd2
Glycerol-3-phosphate dehydrogenase 2.
   
 
  0.638
piga
Phosphatidylinositol glycan anchor biosynthesis class A.
  
 
 0.566
alg11
ALG11 alpha-1,2-mannosyltransferase.
  
 
 0.566
gys2
Glycogen synthase 2.
  
 
 0.566
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.