STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114666013Cystatin-like. (132 aa)    
Predicted Functional Partners:
rps14
Ribosomal protein S14.
   
 0.760
ctsw
Cathepsin W.
   
0.700
LOC114663960
Progranulin-like.
   
 0.678
grn
Granulin precursor.
   
 0.678
ctso
Cathepsin O.
   
 0.645
mrps11
Mitochondrial ribosomal protein S11.
   
 0.572
ctsc
Cathepsin C.
   
 0.570
ctsb
Cathepsin B.
   
 0.570
ctsz
Cathepsin Z.
   
 0.570
bcl2
BCL2 apoptosis regulator.
   
 
  0.568
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.