STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc26a11Solute carrier family 26 member 11. (596 aa)    
Predicted Functional Partners:
lyrm4
LYR motif containing 4.
    
 0.869
LOC114665637
Heme-binding protein 1-like.
   
 0.861
mre11
MRE11 homolog, double strand break repair nuclease.
  
  0.839
ENSECRP00000004917
annotation not available
     
 0.679
ENSECRP00000006026
annotation not available
     
 0.679
ENSECRP00000007585
annotation not available
     
 0.679
ENSECRP00000014452
annotation not available
     
 0.679
ENSECRP00000016547
annotation not available
     
 0.679
lgr4
Leucine rich repeat containing G protein-coupled receptor 4.
     
 0.679
aldh18a1
Aldehyde dehydrogenase 18 family member A1.
    
 0.668
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.