STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114647884Uncharacterized LOC114647884. (619 aa)    
Predicted Functional Partners:
ENSECRP00000011985
annotation not available
    
  0.839
rab3ip
RAB3A interacting protein.
    
 0.780
dync1li2
Dynein cytoplasmic 1 light intermediate chain 2.
    
  0.765
dync1li1
Dynein cytoplasmic 1 light intermediate chain 1.
    
  0.765
LOC114662096
Rab proteins geranylgeranyltransferase component A 2-like.
    
 0.734
c9orf72
C9orf72-SMCR8 complex subunit.
    
  0.733
gdi2
GDP dissociation inhibitor 2.
   
 0.731
LOC114660500
Rab GDP dissociation inhibitor alpha-like.
   
 0.731
LOC114668080
Ras and EF-hand domain-containing protein homolog.
 
      0.710
ENSECRP00000008069
annotation not available
 
      0.706
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.