STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ifngr1Interferon gamma receptor 1. (526 aa)    
Predicted Functional Partners:
LOC114641458
Interferon alpha/beta receptor 1a-like.
     
 0.909
jak1
Janus kinase 1.
     
 0.868
ENSECRP00000023978
annotation not available
     
 0.855
wbp2nl
WBP2 N-terminal like.
     
 0.855
jak2
Janus kinase 2.
     
 0.845
tyk2
Tyrosine kinase 2.
     
 0.845
jak3
Janus kinase 3.
     
 0.845
LOC114641455
Interleukin-10 receptor subunit beta-like.
     
 0.751
LOC114641457
Interferon alpha/beta receptor 1a-like.
     
 0.742
tp53bp2
Tumor protein p53 binding protein 2.
     
 0.680
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.