STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rp2RP2 activator of ARL3 GTPase. (356 aa)    
Predicted Functional Partners:
LOC114648577
ADP-ribosylation factor-like protein 3.
    
 0.955
arl3
ADP ribosylation factor like GTPase 3.
    
 0.955
ENSECRP00000023171
annotation not available
    
 0.881
tbcd
Tubulin folding cofactor D.
    
 0.839
tbce
Tubulin folding cofactor E.
    
 0.832
unc119b
Unc-119 lipid binding chaperone B.
     
 0.804
ap2s1
Adaptor related protein complex 2 subunit sigma 1.
   
 
  0.746
unc119
Unc-119 lipid binding chaperone.
     
 0.732
nphp3
Nephrocystin 3.
     
 0.690
arl2
ADP ribosylation factor like GTPase 2.
    
 
 0.578
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.