STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
map3k21Mitogen-activated protein kinase kinase kinase 21. (998 aa)    
Predicted Functional Partners:
map2k7
Mitogen-activated protein kinase kinase 7.
   
0.830
ENSECRP00000011256
annotation not available
    
 0.827
cd247
CD247 molecule.
   
 0.824
mib2
Mindbomb E3 ubiquitin protein ligase 2.
  
 0.814
tab1
TGF-beta activated kinase 1 (MAP3K7) binding protein 1.
   
 0.808
traf6
TNF receptor associated factor 6.
    
 0.802
cdc42
Cell division cycle 42.
  
 0.802
map2k4
Mitogen-activated protein kinase kinase 4.
   
 0.801
myd88
MYD88 innate immune signal transduction adaptor.
   
 0.763
htt
Huntingtin.
   
 0.756
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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