STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plekPleckstrin. (350 aa)    
Predicted Functional Partners:
LOC114658900
Regulator of G-protein signaling 21-like.
   
  
 0.525
grid2ip
Grid2 interacting protein.
    
 
 0.504
cdc42
Cell division cycle 42.
   
 
 0.484
LOC114654415
Talin-1-like.
     
 0.482
tlnrd1
Talin rod domain containing 1.
     
 0.476
tln2
Talin 2.
     
 0.476
cnn2
Calponin 2.
     
 0.465
cnn3
Calponin 3.
     
 0.465
cnn1
Calponin 1.
     
 0.465
tagln3
Transgelin 3.
     
 0.460
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.