STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114660987Jupiter microtubule associated homolog 2-like. (233 aa)    
Predicted Functional Partners:
yars1
tyrosyl-tRNA synthetase 1.
  
  
 0.705
ENSECRP00000013923
annotation not available
      
0.556
cramp1
Cramped chromatin regulator homolog 1.
      
 0.511
hddc3
HD domain containing 3.
  
    0.499
mtrex
Mtr4 exosome RNA helicase.
      
 0.491
ppp6c
Protein phosphatase 6 catalytic subunit.
   
   0.457
arsg
Arylsulfatase G.
     
 0.433
yars2
tyrosyl-tRNA synthetase 2.
     
 0.421
eprs1
glutamyl-prolyl-tRNA synthetase 1.
  
 
 0.413
corin
Corin, serine peptidase.
      
 0.410
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.