STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tpcn2Two pore segment channel 2. (770 aa)    
Predicted Functional Partners:
unc79
Unc-79 homolog, NALCN channel complex subunit.
   
 0.997
tpcn1
Two pore segment channel 1.
    
0.894
LOC114665876
Two pore calcium channel protein 1-like.
    
0.877
LOC114651812
ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 1-like.
     
 0.845
cacng1
Calcium voltage-gated channel auxiliary subunit gamma 1.
    
 0.824
wdr35
WD repeat domain 35.
    
 0.809
wdr19
WD repeat domain 19.
    
 0.795
ift140
Intraflagellar transport 140.
    
 0.792
LOC114643408
Intraflagellar transport protein 122 homolog.
   
 0.743
ift122
Intraflagellar transport 122.
   
 0.743
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.