Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ascl1 | gata2 | ENSECRP00000008602 | ENSECRP00000033586 | Achaete-scute family bHLH transcription factor 1. | GATA binding protein 2. | 0.437 |
ascl1 | gata3 | ENSECRP00000008602 | ENSECRP00000015015 | Achaete-scute family bHLH transcription factor 1. | GATA binding protein 3. | 0.437 |
ascl1 | gata4 | ENSECRP00000008602 | ENSECRP00000006864 | Achaete-scute family bHLH transcription factor 1. | GATA binding protein 4. | 0.428 |
ascl1 | isl1 | ENSECRP00000008602 | ENSECRP00000020304 | Achaete-scute family bHLH transcription factor 1. | ISL LIM homeobox 1. | 0.591 |
ascl1 | ldb1 | ENSECRP00000008602 | ENSECRP00000003962 | Achaete-scute family bHLH transcription factor 1. | LIM domain binding 1. | 0.612 |
ascl1 | ldb2 | ENSECRP00000008602 | ENSECRP00000004943 | Achaete-scute family bHLH transcription factor 1. | LIM domain binding 2. | 0.612 |
gata2 | ascl1 | ENSECRP00000033586 | ENSECRP00000008602 | GATA binding protein 2. | Achaete-scute family bHLH transcription factor 1. | 0.437 |
gata2 | gata4 | ENSECRP00000033586 | ENSECRP00000006864 | GATA binding protein 2. | GATA binding protein 4. | 0.613 |
gata2 | isl1 | ENSECRP00000033586 | ENSECRP00000020304 | GATA binding protein 2. | ISL LIM homeobox 1. | 0.536 |
gata2 | ldb1 | ENSECRP00000033586 | ENSECRP00000003962 | GATA binding protein 2. | LIM domain binding 1. | 0.810 |
gata2 | ldb2 | ENSECRP00000033586 | ENSECRP00000004943 | GATA binding protein 2. | LIM domain binding 2. | 0.770 |
gata2 | srf | ENSECRP00000033586 | ENSECRP00000030620 | GATA binding protein 2. | Serum response factor. | 0.792 |
gata3 | ascl1 | ENSECRP00000015015 | ENSECRP00000008602 | GATA binding protein 3. | Achaete-scute family bHLH transcription factor 1. | 0.437 |
gata3 | gata4 | ENSECRP00000015015 | ENSECRP00000006864 | GATA binding protein 3. | GATA binding protein 4. | 0.613 |
gata3 | isl1 | ENSECRP00000015015 | ENSECRP00000020304 | GATA binding protein 3. | ISL LIM homeobox 1. | 0.536 |
gata3 | ldb1 | ENSECRP00000015015 | ENSECRP00000003962 | GATA binding protein 3. | LIM domain binding 1. | 0.770 |
gata3 | ldb2 | ENSECRP00000015015 | ENSECRP00000004943 | GATA binding protein 3. | LIM domain binding 2. | 0.770 |
gata3 | srf | ENSECRP00000015015 | ENSECRP00000030620 | GATA binding protein 3. | Serum response factor. | 0.792 |
gata4 | ascl1 | ENSECRP00000006864 | ENSECRP00000008602 | GATA binding protein 4. | Achaete-scute family bHLH transcription factor 1. | 0.428 |
gata4 | gata2 | ENSECRP00000006864 | ENSECRP00000033586 | GATA binding protein 4. | GATA binding protein 2. | 0.613 |
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