STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114661551Chymase-like. (257 aa)    
Predicted Functional Partners:
ENSECRP00000022943
annotation not available
    
 0.784
met
MET proto-oncogene, receptor tyrosine kinase.
    
  0.779
ptk7
Protein tyrosine kinase 7 (inactive).
    
  0.630
ENSECRP00000011256
annotation not available
    
  0.614
tfpi
Tissue factor pathway inhibitor.
    
  0.613
LOC114657127
Chymotrypsin A-like.
  
0.606
LOC114656887
Transmembrane protease serine 4-like.
  
 
 
0.605
hgfac
HGF activator.
  
 
0.603
ctrl
Chymotrypsin like.
  
0.601
LOC114648354
Kunitz-type protease inhibitor 2-like.
    
 0.568
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.