STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114657697ATP-binding cassette sub-family G member 4-like. (567 aa)    
Predicted Functional Partners:
abcg5
ATP binding cassette subfamily G member 5.
   
0.881
LOC114667284
Apolipoprotein A-IV-like.
   
 0.727
LOC114647154
Cytochrome c oxidase assembly protein COX15 homolog.
    
 0.653
igbp1
Immunoglobulin binding protein 1.
    
 0.648
LOC114662354
Uncharacterized LOC114662354.
    
 0.630
atp5f1a
ATP synthase F1 subunit alpha.
   
 0.625
atp5f1c
ATP synthase F1 subunit gamma.
  
  0.622
cdca8
Cell division cycle associated 8.
  
 
 0.604
ENSECRP00000011580
annotation not available
     
 0.599
atp5f1d
ATP synthase F1 subunit delta.
  
  0.598
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.