STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSECRP00000020559annotation not available (253 aa)    
Predicted Functional Partners:
wdr74
WD repeat domain 74.
      
 0.509
ccdc186
Coiled-coil domain containing 186.
      
 0.440
ENSECRP00000009013
annotation not available
      
 0.438
nhlrc2
NHL repeat containing 2.
      
 0.438
tectb
Tectorin beta.
      
 0.437
LOC114664633
Plexin domain-containing protein 1-like.
      
 0.428
LOC114667706
RNA-binding protein with multiple splicing 2-like.
      
 0.428
LOC114667731
RNA-binding protein with multiple splicing 2.
      
 0.428
leprotl1
Leptin receptor overlapping transcript like 1.
      
 0.428
vti1a
Vesicle transport through interaction with t-SNAREs 1A.
      
 0.426
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.