STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
asb2Ankyrin repeat and SOCS box containing 2. (548 aa)    
Predicted Functional Partners:
cul5
Cullin 5.
    
 0.938
rnf7
Ring finger protein 7.
    
 0.867
eloc
Elongin C.
    
 0.846
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.776
elob
Elongin B.
    
 0.739
commd8
COMM domain containing 8.
   
  0.716
nedd8
NEDD8 ubiquitin like modifier.
    
  0.716
commd1
Copper metabolism domain containing 1.
    
  0.698
LOC114662125
Ankyrin repeat and SOCS box protein 12-like.
  
 
0.683
LOC114667897
COMM domain-containing protein 4-like.
    
  0.677
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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