STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSECRP00000020617annotation not available (940 aa)    
Predicted Functional Partners:
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
   
 0.947
ENSECRP00000020529
annotation not available
 
      0.900
ENSECRP00000020547
annotation not available
 
      0.900
ruvbl1
RuvB like AAA ATPase 1.
    
 0.824
ruvbl2
RuvB like AAA ATPase 2.
   
 0.818
dpy30
Dpy-30 histone methyltransferase complex regulatory subunit.
    
  0.800
ssrp1
Structure specific recognition protein 1.
    
 0.799
arid4a
AT-rich interaction domain 4A.
   
 0.789
arid4b
AT-rich interaction domain 4B.
   
 0.789
ino80c
INO80 complex subunit C.
    
 0.773
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.