STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
atp5f1dATP synthase F1 subunit delta. (163 aa)    
Predicted Functional Partners:
atp5po
ATP synthase peripheral stalk subunit OSCP.
  
 0.999
ENSECRP00000006449
annotation not available
   
 0.999
atp5pb
ATP synthase peripheral stalk-membrane subunit b.
   
 0.999
atp5f1e
ATP synthase F1 subunit epsilon.
   
 0.999
atp5mg
ATP synthase membrane subunit g.
   
 0.999
atp5f1c
ATP synthase F1 subunit gamma.
  
 0.999
atp6v0c
ATPase H+ transporting V0 subunit c.
  
 0.999
atp5pd
ATP synthase peripheral stalk subunit d.
   
 0.999
atp5f1b
ATP synthase F1 subunit beta.
  
 0.999
atp5f1a
ATP synthase F1 subunit alpha.
  
 0.999
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.