STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSECRP00000020760annotation not available (350 aa)    
Predicted Functional Partners:
ENSECRP00000028195
annotation not available
    
 0.767
lnx2
Ligand of numb-protein X 2.
    
 0.755
patj
PATJ crumbs cell polarity complex component.
    
 0.755
lnx1
Ligand of numb-protein X 1.
    
 0.755
mpdz
Multiple PDZ domain crumbs cell polarity complex component.
    
 0.755
ENSECRP00000016790
annotation not available
    
 0.755
LOC114662400
Ligand of Numb protein X 2-like.
    
 0.755
mpp4
Membrane palmitoylated protein 4.
   
  0.742
pard6a
Par-6 family cell polarity regulator alpha.
    
 0.736
ENSECRP00000016030
annotation not available
    
 0.736
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.