STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pigwPhosphatidylinositol glycan anchor biosynthesis class W. (500 aa)    
Predicted Functional Partners:
ENSECRP00000021023
annotation not available
   
 0.961
pigp
Phosphatidylinositol glycan anchor biosynthesis class P.
    
 0.956
gbe1
1,4-alpha-glucan branching enzyme 1.
  
 0.944
pigl
Phosphatidylinositol glycan anchor biosynthesis class L.
  
 
 0.935
pigq
Phosphatidylinositol glycan anchor biosynthesis class Q.
    
 0.934
pigh
Phosphatidylinositol glycan anchor biosynthesis class H.
    
 0.934
pigm
Phosphatidylinositol glycan anchor biosynthesis class M.
   
 
 0.927
dpm2
Dolichyl-phosphate mannosyltransferase subunit 2, regulatory.
    
 0.919
gmppb
GDP-mannose pyrophosphorylase B.
  
 0.901
ENSECRP00000004184
annotation not available
  
 0.895
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.