STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSECRP00000020996annotation not available (214 aa)    
Predicted Functional Partners:
plat
Plasminogen activator, tissue type.
    
   0.569
plau
Plasminogen activator, urokinase.
    
   0.569
cd79a
CD79a molecule.
   
 0.563
tfpi
Tissue factor pathway inhibitor.
    
   0.553
LOC114656450
Microtubule-associated protein 2-like.
    
   0.548
mapt
Microtubule associated protein tau.
    
   0.548
gnb2
G protein subunit beta 2.
    
   0.543
LOC114646404
Guanine nucleotide-binding protein subunit beta-4.
    
   0.543
gnb3
G protein subunit beta 3.
    
   0.543
ptk7
Protein tyrosine kinase 7 (inactive).
    
  0.502
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.