STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
znhit3Zinc finger HIT-type containing 3. (153 aa)    
Predicted Functional Partners:
ENSECRP00000015455
annotation not available
    
 0.974
nop58
NOP58 ribonucleoprotein.
    
 0.884
ENSECRP00000014019
annotation not available
     
 0.873
nop56
NOP56 ribonucleoprotein.
     
 0.835
nufip1
Nuclear FMR1 interacting protein 1.
    
 0.720
pih1d2
PIH1 domain containing 2.
     
 0.698
snu13
Small nuclear ribonucleoprotein 13.
   
 0.588
ENSECRP00000009403
annotation not available
      
 0.536
tada2a
Transcriptional adaptor 2A.
    
 
 0.532
znhit2
Zinc finger HIT-type containing 2.
      
 0.524
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.