STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114647905Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1-like. (499 aa)    
Predicted Functional Partners:
ENSECRP00000033382
annotation not available
   
 0.677
ENSECRP00000030047
annotation not available
     
 0.580
c4b
Complement C4B (Chido blood group).
    
  0.579
ENSECRP00000004594
annotation not available
    
  0.579
phc3
Polyhomeotic homolog 3.
    
  0.579
phc1
Polyhomeotic homolog 1.
    
  0.579
phc2
Polyhomeotic homolog 2.
    
  0.579
ENSECRP00000021085
annotation not available
    
  0.579
ENSECRP00000021221
annotation not available
    
  0.579
ENSECRP00000021317
annotation not available
    
  0.579
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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