STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSECRP00000021284annotation not available (1168 aa)    
Predicted Functional Partners:
tep1
Telomerase associated protein 1.
   
 0.940
tep1-2
Telomerase associated protein 1.
   
 0.940
LOC114661989
Probable endonuclease 4.
   
 0.866
nthl1
Nth like DNA glycosylase 1.
  
 0.818
snrpd3
Small nuclear ribonucleoprotein D3 polypeptide.
   
 0.816
LOC114648872
Proliferating cell nuclear antigen.
  
 0.809
mutyh
mutY DNA glycosylase.
   
 0.771
snrpd2
Small nuclear ribonucleoprotein D2 polypeptide.
   
 0.770
ogg1
8-oxoguanine DNA glycosylase.
  
 0.760
snrpf
Small nuclear ribonucleoprotein polypeptide F.
   
 0.755
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.