STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ptprgProtein tyrosine phosphatase receptor type G. (692 aa)    
Predicted Functional Partners:
ENSECRP00000021378
annotation not available
 
  
  0.958
cntn1
Contactin 1.
    
 0.833
cntn5
Contactin 5.
    
 0.833
LOC114668901
Contactin-4-like.
    
 0.833
cntn2
Contactin 2.
    
 0.828
mapk11
Mitogen-activated protein kinase 11.
    
 0.814
LOC114656052
Mitogen-activated protein kinase 12-like.
    
 0.814
ENSECRP00000006314
annotation not available
    
 0.814
ENSECRP00000006324
annotation not available
    
 0.814
mapk7
Mitogen-activated protein kinase 7.
    
 0.814
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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