STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
eaf1ELL associated factor 1. (261 aa)    
Predicted Functional Partners:
aff1
AF4/FMR2 family member 1.
    
 0.990
LOC114667288
RNA polymerase II elongation factor ELL2-like.
    
 0.987
aff4
AF4/FMR2 family member 4.
    
 0.985
eaf2
ELL associated factor 2.
  
 
0.984
ell
Elongation factor for RNA polymerase II.
    
 0.984
ell2
Elongation factor for RNA polymerase II 2.
    
 0.983
supt5h
SPT5 homolog, DSIF elongation factor subunit.
    
 0.982
supt4h1
SPT4 homolog, DSIF elongation factor subunit.
    
  0.980
ice2
Interactor of little elongation complex ELL subunit 2.
    
 0.973
cdk9
Cyclin dependent kinase 9.
   
 0.951
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.