STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc1a5Solute carrier family 1 member 5. (531 aa)    
Predicted Functional Partners:
aldh7a1
Aldehyde dehydrogenase 7 family member A1.
  
 
 0.546
slc13a1
Solute carrier family 13 member 1.
    
 0.540
LOC114645949
Solute carrier family 13 member 1-like.
    
 0.540
slc13a4
Solute carrier family 13 member 4.
    
 0.540
slc13a5
Solute carrier family 13 member 5.
    
 0.540
slc13a2
Solute carrier family 13 member 2.
    
 0.540
slc13a3
Solute carrier family 13 member 3.
    
 0.540
slc7a5
Solute carrier family 7 member 5.
  
  
 0.524
mtr
5-methyltetrahydrofolate-homocysteine methyltransferase.
    
 0.521
abat
4-aminobutyrate aminotransferase.
  
 
 0.497
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.