STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
c5Complement C5. (1697 aa)    
Predicted Functional Partners:
c9
Complement C9.
   
 0.998
c8a
Complement C8 alpha chain.
   
 0.996
LOC114657290
Complement component C8 gamma chain-like.
   
 0.992
c8b
Complement C8 beta chain.
   
 0.951
adam10
ADAM metallopeptidase domain 10.
     
 0.933
spg7
SPG7 matrix AAA peptidase subunit, paraplegin.
    
  0.932
plekha7
Pleckstrin homology domain containing A7.
    
  0.892
c6
Complement C6.
   
 
 0.877
LOC114655073
C3a anaphylatoxin chemotactic receptor-like.
    
 0.877
ENSECRP00000020647
annotation not available
    
 0.877
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.