STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plxna2Plexin A2. (1890 aa)    
Predicted Functional Partners:
nrp1
Neuropilin 1.
    
 0.871
LOC114646016
semaphorin-7A-like.
    
0.765
sema7a
Semaphorin 7A (John Milton Hagen blood group).
    
 0.765
ENSECRP00000021270
annotation not available
    
0.751
sema4d
Semaphorin 4D.
    
0.751
LOC114662765
semaphorin-4E-like.
    
0.751
rnd3
Rho family GTPase 3.
    
 0.715
rnd1
Rho family GTPase 1.
    
 0.715
sema3e
Semaphorin 3E.
    
0.714
sema3g
Semaphorin 3G.
    
0.712
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.