STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fnbp1Formin binding protein 1. (652 aa)    
Predicted Functional Partners:
itsn2
Intersectin 2.
   
 0.940
ENSECRP00000002444
annotation not available
   
 0.858
was
WASP actin nucleation promoting factor.
   
 0.858
ENSECRP00000032407
annotation not available
   
 0.858
itsn1
Intersectin 1.
   
 0.855
cdc42
Cell division cycle 42.
    
 0.854
tsen2
tRNA splicing endonuclease subunit 2.
    
   0.817
LOC114658015
Cell division control protein 42 homolog.
    
 0.772
fnbp1l
Formin binding protein 1 like.
  
 
0.767
rhoh
Ras homolog family member H.
    
 0.764
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.