STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
auhAU RNA binding methylglutaconyl-CoA hydratase. (338 aa)    
Predicted Functional Partners:
hadh
hydroxyacyl-CoA dehydrogenase.
 0.982
hmgcl
3-hydroxy-3-methylglutaryl-CoA lyase.
 
 
 0.946
LOC114643391
3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic-like.
 
 
 0.940
scp2
Sterol carrier protein 2.
  
 0.939
hsdl2
Hydroxysteroid dehydrogenase like 2.
  
 0.911
LOC114659600
methylcrotonoyl-CoA carboxylase beta chain, mitochondrial-like.
  
 
 0.906
mccc2
methylcrotonoyl-CoA carboxylase 2.
  
 
 0.906
hmgcs1
3-hydroxy-3-methylglutaryl-CoA synthase 1.
  
 
 0.901
ivd
isovaleryl-CoA dehydrogenase.
  
 0.891
mccc1
methylcrotonoyl-CoA carboxylase 1.
  
 0.878
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.