STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114660392Peroxisomal N(1)-acetyl-spermine/spermidine oxidase-like. (542 aa)    
Predicted Functional Partners:
srm
Spermidine synthase.
     
 0.881
sms
Spermine synthase.
     
 0.877
aoc3
Amine oxidase copper containing 3.
     
 0.855
smox
Spermine oxidase.
  
  
 
0.854
LOC114655958
Spermine oxidase-like.
  
  
 
0.852
LOC114668691
Aldehyde dehydrogenase family 3 member B1-like.
    
 0.849
aldh16a1
Aldehyde dehydrogenase 16 family member A1.
    
  0.846
aldh2
Aldehyde dehydrogenase 2 family member.
    
  0.846
aldh7a1
Aldehyde dehydrogenase 7 family member A1.
    
  0.837
aldh9a1
Aldehyde dehydrogenase 9 family member A1.
    
  0.836
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.