STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSECRP00000022330annotation not available (225 aa)    
Predicted Functional Partners:
rps27a
Ribosomal protein S27a.
    
  0.473
ENSECRP00000033892
annotation not available
  
 
   0.462
ENSECRP00000023153
annotation not available
  
     0.460
gas7
Growth arrest specific 7.
    
  0.447
ENSECRP00000022685
annotation not available
  
     0.437
ENSECRP00000021680
annotation not available
  
     0.435
ENSECRP00000029101
annotation not available
  
     0.431
ENSECRP00000009144
annotation not available
  
 
   0.416
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.