STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSECRP00000022345annotation not available (170 aa)    
Predicted Functional Partners:
cask
Calcium/calmodulin dependent serine protein kinase.
    
 0.639
ppp1r11
Protein phosphatase 1 regulatory inhibitor subunit 11.
      
 0.564
setd4
SET domain containing 4.
      
 0.564
LOC114643685
Growth arrest-specific protein 6-like.
    
 
 0.506
ptk7
Protein tyrosine kinase 7 (inactive).
    
  0.502
ppp1r8
Protein phosphatase 1 regulatory subunit 8.
      
 0.497
lgals9
Galectin 9.
   
 0.496
lgals9-2
Galectin 9.
   
 0.496
mpp1
Membrane palmitoylated protein 1.
    
 0.483
ENSECRP00000026763
annotation not available
    
 
 0.475
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.