STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114665360Ammonium transporter Rh type A-like. (416 aa)    
Predicted Functional Partners:
ENSECRP00000013299
annotation not available
  
 
0.689
LOC114667327
Ammonium transporter Rh type C 2-like.
  
 
0.683
LOC114646027
Ammonium transporter Rh type B-B-like.
  
 
0.682
rhag
Rh associated glycoprotein.
  
 
0.680
aqp1
Aquaporin 1 (Colton blood group).
   
 
 0.659
slc4a1
Solute carrier family 4 member 1 (Diego blood group).
   
 
 0.577
ENSECRP00000022631
annotation not available
      
 0.555
tmem50a
Transmembrane protein 50A.
      
 0.554
slc4a2
Solute carrier family 4 member 2.
   
 
 0.548
maco1
Macoilin 1.
      
 0.548
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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