STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pctpPhosphatidylcholine transfer protein. (215 aa)    
Predicted Functional Partners:
acot13
acyl-CoA thioesterase 13.
    
 
 0.646
stard5
StAR related lipid transfer domain containing 5.
   
  
 0.575
stard3
StAR related lipid transfer domain containing 3.
      
 0.560
stard4
StAR related lipid transfer domain containing 4.
      
 0.558
stard6
StAR related lipid transfer domain containing 6.
      
 0.555
eln
Elastin.
      
 0.540
LOC114660148
START domain-containing protein 10-like.
      
0.479
cert1
Ceramide transporter 1.
      
 0.426
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.