STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
invsInversin. (1176 aa)    
Predicted Functional Partners:
dvl3
Dishevelled segment polarity protein 3.
    
 0.892
dvl1
Dishevelled segment polarity protein 1.
    
 0.892
dvl2
Dishevelled segment polarity protein 2.
    
 0.892
ift88
Intraflagellar transport 88.
   
 0.793
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.782
ift81
Intraflagellar transport 81.
    
 0.706
nek8
NIMA related kinase 8.
    
 
 0.700
nphp3
Nephrocystin 3.
   
 0.681
nphp1
Nephrocystin 1.
    
 0.668
nek9
NIMA related kinase 9.
    
 0.664
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.