STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSECRP00000022712annotation not available (332 aa)    
Predicted Functional Partners:
ENSECRP00000014631
annotation not available
    
 0.764
ptprc
Protein tyrosine phosphatase receptor type C.
    
  0.648
LOC114666621
Fc receptor-like protein 5.
  
 
  0.546
ENSECRP00000004917
annotation not available
    
  0.514
ENSECRP00000006026
annotation not available
    
  0.514
ENSECRP00000007585
annotation not available
    
  0.514
ENSECRP00000014452
annotation not available
    
  0.514
ENSECRP00000016547
annotation not available
    
  0.514
lgr4
Leucine rich repeat containing G protein-coupled receptor 4.
    
  0.514
LOC114643328
B-cell receptor CD22-like.
  
  
0.491
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.