STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114665161Putative uncharacterized protein MYH16. (1098 aa)    
Predicted Functional Partners:
myl1
Myosin light chain 1.
   
 0.947
LOC114653424
Myosin regulatory light chain 2, smooth muscle minor isoform.
   
 0.890
LOC114659546
Myosin regulatory light polypeptide 9.
   
 0.890
ENSECRP00000006410
annotation not available
 
 
 0.876
LOC114654330
myosin-IIIb-like.
 
  
  0.870
ENSECRP00000027794
annotation not available
 
 
 0.866
LOC114648833
Myosin light polypeptide 6-like.
   
 0.853
myl7
Myosin light chain 7.
   
 0.821
mylpf
Myosin light chain, phosphorylatable, fast skeletal muscle.
   
 0.789
ENSECRP00000009191
annotation not available
    
 0.787
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.