STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSECRP00000023004annotation not available (145 aa)    
Predicted Functional Partners:
cul3
Cullin 3.
    
 0.960
ENSECRP00000022967
annotation not available
    
 0.878
cul1
Cullin 1.
    
 0.845
ENSECRP00000025350
annotation not available
    
 0.845
rbx1
Ring-box 1.
    
 0.812
kbtbd7
Kelch repeat and BTB domain containing 7.
    
 0.800
cacul1
CDK2 associated cullin domain 1.
    
 0.772
klhl20
Kelch like family member 20.
    
 0.764
gan
Gigaxonin.
    
  0.764
klhl15
Kelch like family member 15.
    
  0.752
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.