STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSECRP00000023185annotation not available (336 aa)    
Predicted Functional Partners:
ENSECRP00000004917
annotation not available
    
  0.514
ENSECRP00000006026
annotation not available
    
  0.514
ENSECRP00000007585
annotation not available
    
  0.514
ENSECRP00000014452
annotation not available
    
  0.514
ENSECRP00000016547
annotation not available
    
  0.514
lgr4
Leucine rich repeat containing G protein-coupled receptor 4.
    
  0.514
hgfac
HGF activator.
    
  0.467
ENSECRP00000004409
annotation not available
    
  0.467
habp2
Hyaluronan binding protein 2.
    
  0.467
lrit3
Leucine rich repeat, Ig-like and transmembrane domains 3.
    
  0.431
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.