STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
coq6Coenzyme Q6, monooxygenase. (490 aa)    
Predicted Functional Partners:
coq3
Coenzyme Q3, methyltransferase.
 
 
 0.991
coq9
Coenzyme Q9.
   
 0.989
coq4
Coenzyme Q4.
 
 
 0.983
coq7
Coenzyme Q7, hydroxylase.
   
 0.975
coq2
Coenzyme Q2, polyprenyltransferase.
 
  
 0.931
aasdh
Aminoadipate-semialdehyde dehydrogenase.
  
 
 0.918
LOC114648548
Cytochrome b5 reductase 4.
  
 0.917
kynu
Kynureninase.
  
 
 0.897
lss
Lanosterol synthase.
  
 
 0.885
LOC114657013
Cholesterol 7-desaturase-like.
  
 
 0.874
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.