STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSECRP00000023442annotation not available (367 aa)    
Predicted Functional Partners:
LOC114654278
Cytochrome c oxidase subunit 7C, mitochondrial.
   
 0.876
hexb
Hexosaminidase subunit beta.
    
 0.873
LOC114649969
Cytochrome c oxidase subunit 5B, mitochondrial.
   
 0.843
LOC114645165
Cytochrome c oxidase subunit 5B, mitochondrial-like.
   
 0.843
LOC114667733
Cytochrome c oxidase subunit 5A, mitochondrial.
   
 0.837
ENSECRP00000009972
annotation not available
   
 0.818
trir
Telomerase RNA component interacting RNase.
   
 0.818
LOC114661048
Cytochrome c oxidase subunit 6B1.
   
 0.818
LOC114666881
Cytochrome c oxidase subunit 6B1.
   
 0.818
ENSECRP00000030176
annotation not available
   
 0.818
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.