STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSECRP00000023510annotation not available (211 aa)    
Predicted Functional Partners:
usp36
Ubiquitin specific peptidase 36.
 
     0.921
suds3
SDS3 homolog, SIN3A corepressor complex component.
    
 0.726
rce1
Ras converting CAAX endopeptidase 1.
     
 0.701
LOC114652164
Breast cancer metastasis-suppressor 1 homolog.
    
  0.646
brms1l
BRMS1 like transcriptional repressor.
    
  0.646
tp53
Tumor protein p53.
    
 0.595
cdc25b
Cell division cycle 25B.
    
 0.589
cdc25c
Cell division cycle 25C.
    
 0.589
ENSECRP00000000840
annotation not available
    
  0.545
usp10
Ubiquitin specific peptidase 10.
     
 0.535
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.