STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mpv17lMPV17 mitochondrial inner membrane protein like. (202 aa)    
Predicted Functional Partners:
mpv17l2
MPV17 mitochondrial inner membrane protein like 2.
     
0.849
pex19
Peroxisomal biogenesis factor 19.
    
 0.748
ENSECRP00000011014
annotation not available
     
 0.669
pxmp2
Peroxisomal membrane protein 2.
     
0.669
pex3
Peroxisomal biogenesis factor 3.
   
 
 0.660
pex16
Peroxisomal biogenesis factor 16.
     
 0.647
pex10
Peroxisomal biogenesis factor 10.
     
 0.639
eci2
enoyl-CoA delta isomerase 2.
   
 
 0.634
LOC114655588
Tricarboxylate transport protein, mitochondrial-like.
   
 
 0.633
LOC114669139
Tricarboxylate transport protein, mitochondrial.
   
 
 0.633
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.