STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc25a26Solute carrier family 25 member 26. (267 aa)    
Predicted Functional Partners:
wdr48
WD repeat domain 48.
 
      0.814
nfs1
NFS1 cysteine desulfurase.
 
    
 0.777
slc25a38
Solute carrier family 25 member 38.
    
 
0.596
taldo1
Transaldolase 1.
 
 
    0.578
slc25a3
Solute carrier family 25 member 3.
      
 0.562
thoc7
THO complex 7.
      
 0.556
psmd6
Proteasome 26S subunit, non-ATPase 6.
      
 0.554
slc25a32
Solute carrier family 25 member 32.
      
0.554
mrpl57
Mitochondrial ribosomal protein L57.
      
 0.535
pphln1
Periphilin 1.
      
 0.491
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.