STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114667662Intercellular adhesion molecule 1-like. (544 aa)    
Predicted Functional Partners:
LOC114649054
Integrin alpha-X-like.
    
 0.737
itgal
Integrin subunit alpha L.
    
 0.737
itgae
Integrin subunit alpha E.
    
 0.737
ENSECRP00000033804
annotation not available
    
 0.737
LOC114661722
Integrin alpha-M-like.
    
 0.737
LOC114661721
Integrin alpha-M-like.
    
 0.737
itga4
Integrin subunit alpha 4.
    
  0.709
itga9
Integrin subunit alpha 9.
    
  0.709
ENSECRP00000012593
annotation not available
    
  0.678
ENSECRP00000012609
annotation not available
    
  0.678
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.